WebAug 12, 2024 · Description gffread website GFF/GTF parsing utility providing format conversions, region filtering, FASTA sequence extraction and more. Environment … WebMay 20, 2024 · gffread merges UTR features into exons, but no structural information is lost about them when both exon and CDS features are present (just subtract the CDS intervals from exon intervals and you get the UTRs) by default gffread discards non-transcript features like "protein", "region" etc.
Gffread to extract transcript sequences from transcript ... - GitHub
WebAug 24, 2016 · *** buffer overflow detected ***: gffread terminated #2 Closed bananabenana opened this issue on Aug 24, 2016 · 1 comment bananabenana commented on Aug 24, 2016 • edited gpertea closed this as completed on Aug 25, 2024 krabapple mentioned this issue on Jul 20, 2024 shorter transcript not discarded using -K #78 Closed how many days till february 12 2022
Error: no genomic sequence available (check -g option!). #94
WebJul 7, 2024 · New issue Help wanted with error - gffread related #61 Closed ChrOertlin opened this issue on Jul 7, 2024 · 3 comments ChrOertlin commented on Jul 7, 2024 • … WebFeb 18, 2015 · gffread -h command used to provide help commands, but it seems like the 2.2.1 that comes with cufflinks displays a number of messages and dumps the core. I don't know if this is expected behavi... WebFeb 1, 2024 · Juke34 added the bug Something isn't working label Sep 20, 2024 Juke34 added a commit that referenced this issue Oct 11, 2024 reimplement agat_sp_compare_two_annotations; fix #216 how many days till february 14 2022