WebApr 4, 2024 · The purified DNA library was sequenced using a HighSeq2500 (Illumina, San Diego, CA) at the University of California Irvine Genomics High-Throughput Facility. Purity and integrity of the nucleic acid samples were quantified using a Bioanalyzer (2100 Bioanalyzer, Agilent, Santa Clara, CA). Libraries for next generation mRNA transcriptome ... Websequencing was performed using Illumina HighSeq2500 technology (51-base; pair-ended read). Raw reads were trimmed, and FastQC was used to determine the clean reads.
HiSeq 2500 Documentation - Illumina, Inc.
WebApr 14, 2024 · Background Sharply increased beef consumption is propelling the genetic improvement projects of beef cattle in China. Three-dimensional genome structure is confirmed to be an important layer of transcription regulation. Although genome-wide interaction data of several livestock species have already been produced, the genome … cypress texas 77429
Genome-wide association study reveals the genes associated with …
WebThe Hospital for Sick Children Technology Assessment at SickKids (TASK) APPENDIX A MICROCOSTING AND COST-CONSEQUENCE ANALYSIS OF GENOMIC TESTING WebMar 5, 2024 · RNA-seq was carried out with Illumina Highseq2500. We also performed RNA-seq on two cord-blood samples for computational removal of contamination of blood cells in the placental tissues ( Table S2 ). Principal component analysis (PCA) and sample clustering analysis were performed on our dataset, to explore sample features in gene expression … Websequenced on an Illumina HighSeq2500. The sequencing reads were aligned to GRCh37.p10 using Burrows–Wheeler Aligner software (version 0.59). We then performed local realignment and base quality recalibration of the Burrows– Wheeler aligned reads using the GATK IndelRealigner and the GATK BaseRecalibrator, respectively (broadinstitute. org/). binary lower